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Publications

  1. CellFuse Enables Multimodal Integration of Single-Cell and Spatial Proteomics Data for Systems-Level Analysis in Cancer

    Abhishek Koladiya, Zinaida Good, Sricharan Reddy Varra, Pablo Domizi, Sean C. Bendall et al.

  2. Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition in metastatic TNBC

    Noah F. Greenwald, Iris Nederlof, Cameron Sowers, Daisy Yi Ding, Seongyeol Park et al.

  3. Multi-omic landscape of human gliomas from diagnosis to treatment and recurrence

    Hadeesha Piyadasa, Benjamin Oberlton, Mikaela Ribi, Ke Leow, Jolene S. Ranek et al.

  4. Automated classification of cellular expression in multiplexed imaging data with Nimbus

    Josef Lorenz Rumberger, Noah F. Greenwald, Jolene S. Ranek, Potchara Boonrat, Cameron Walker et al.

  5. WaveOrder: A differentiable wave-optical framework for scalable biological microscopy with diverse modalities

    Talon Chandler, Ivan E. Ivanov, Gabriel Sturm, Sheng Xiao, Xiang Zhao et al.

  6. Rapid Setup of Tissue Microarray and Tiled Area Imaging on the Multiplexed Ion Beam Imaging Microscope using the Tile/SED/Array Interface

    Hadeesha Piyadasa, Benjamin Oberlton, Alex Kong, Christine Camacho Fullaway, Sricharan Reddy Varra et al.

  7. Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering

    Candace C. Liu, Noah F. Greenwald, Alex Kong, Erin F. McCaffrey, Ke Xuan Leow et al.

  8. Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

    Sanjay Jain, Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson et al.